Yael Haberman Ziv, MD, PhD

Machine-learning-based integrative –‘omics analyses reveal immunologic and metabolic dysregulation in environmental enteric dysfunction. Zulqarnain, F; Zhao, X; Setchell, KD R; Sharma, Y; Fernandes, P; Srivastava, S; Shrivastava, A; Ehsan, L; Jain, V; Raghavan, S; Brown, DE; Moore, SR; Ali, SA; Syed, S. iScience. 2024; 27:110013.

Reduced LHFPL3-AS2 lncRNA expression is linked to altered epithelial polarity and proliferation, and to ileal ulceration in Crohn disease. Sosnovski, KE; Braun, T; Amir, A; BenShoshan, M; Abbas-Egbariya, H; Ben-Yishay, R; Anafi, L; Avivi, C; Barshack, I; Denson, LA; Haberman, Y. Scientific Reports. 2023; 13:20513.

Baseline Peripheral Blood Mononuclear Cell Transcriptomics Before Ustekinumab Treatment Is Linked With Crohn's Disease Clinical Response at 1 Year. Granot, M; Braun, T; Efroni, G; Picard, O; Fudim, E; Yavzori, M; Haj, O; Weiss, B; Ben-Horin, S; Kopylov, U; Haberman, Y. Clinical and Translational Gastroenterology. 2023; 14:e00635.

Gut microbial signature in lung cancer patients highlights specific taxa as predictors for durable clinical benefit. Haberman, Y; Kamer, I; Amir, A; Goldenberg, S; Efroni, G; Daniel-Meshulam, I; Lobachov, A; Daher, S; Hadar, R; Gantz-Sorotsky, H; Urban, D; Braun, T; Bar, J. Scientific Reports. 2023; 13:2007.

Mucosal transcriptomics highlight lncRNAs implicated in ulcerative colitis, Crohn's disease, and celiac disease. Braun, T; Sosnovski, KE; Amir, A; BenShoshan, M; VanDussen, KL; Karns, R; Levhar, N; Abbas-Egbariya, H; Hadar, R; Efroni, G; Ferrer, J; Hyams, JS; Denson, LA; Haberman, Y. JCI insight. 2023; 8:e170181.

Achieving pan-microbiome biological insights via the dbBact knowledge base. Amir, A; Ozel, E; Haberman, Y; Shental, N. Nucleic Acids Research. 2023; 51:6593-6608.

Transcriptome analysis in acute gastrointestinal graft-versus host disease reveals a unique signature in children and shared biology with pediatric inflammatory bowel disease. Khandelwal, P; Lounder, DT; Bartlett, A; Haberman, Y; Jegga, AG; Ghandikota, S; Koo, J; Luebbering, N; Leino, D; Abdullah, S; Karns, R; Nelson, AS; Denson, LA; Davies, SM. Haematologica: the hematology journal. 2023; 108:1803-1816.

GATA6-AS1 Regulates Intestinal Epithelial Mitochondrial Functions, and its Reduced Expression is Linked to Intestinal Inflammation and Less Favourable Disease Course in Ulcerative Colitis. Sosnovski, KE; Braun, T; Amir, A; Moshel, D; Benshoshan, M; Vandussen, KL; Levhar, N; Abbas-Egbariya, H; Beider, K; Ben-Yishay, R; Ulitsky, I; Hyams, JS; Denson, LA; Haberman, Y. Journal of Crohn's and Colitis. 2023; 17:960-971.

Multicenter Cohort Study of Infliximab Pharmacokinetics and Therapy Response in Pediatric Acute Severe Ulcerative Colitis. Whaley, KG; Xiong, Y; Karns, R; Hyams, JS; Kugathasan, S; Boyle, BM; Walters, TD; Kelsen, J; LeLeiko, N; Shapiro, J; D'Haens, GR; Denson, LA; Vinks, AA; Rosen, MJ. Clinical Gastroenterology and Hepatology. 2023; 21:1338-1347.

Infantile-onset inflammatory bowel disease has variable long-term outcomes. Krauthammer, A; Weintraub, I; Shaoul, R; Lev-Tzion, R; Broide, E; Wilschanski, M; Lerner, A; Yerushalmi, B; Shouval, DS; Shamaly, H; Haberman-Ziv, Y; Weiss, B. Frontiers in Pediatrics. 2023; 11:1097779.